RetrogeneDB ID: | retro_nleu_2047 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397324.1:8329668..8330262(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSNLEG00000005211 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.44 % |
Parental protein coverage: | 98.49 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFR |
QV.VLDGRGHLLGRLAAIVAKQV.LG.KVVVVRCEGINISGNFYRNKLK.LAF..K.MNTNPSRG..HFR | |
Retrocopy | QVPVLDGRGHLLGRLAAIVAKQVMLGWKVVVVRCEGINISGNFYRNKLKNLAFFCKQMNTNPSRGS*HFR |
Parental | APSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD--KRMVVPAALKVVRLKPTR-FAYLGRLAHE |
..S.IF..TVRGMLPHKTKRGQ.ALD.L.VFD.IPP.YD..KRMVVPAALKVVRLKPTR.FAYLGRLAHE | |
Retrocopy | TRSCIFQWTVRGMLPHKTKRGQVALDHLQVFDSIPPLYDRKKRMVVPAALKVVRLKPTRKFAYLGRLAHE |
Parental | VGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
VGWKYQAVT.TL.EKRKEKA.IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV | |
Retrocopy | VGWKYQAVTTTL-EKRKEKA*IHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |