RetrogeneDB ID: | retro_nleu_2398 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397352.1:879231..879828(+) | ||
Located in intron of: | ENSNLEG00000000878 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSNLEG00000005211 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.57 % |
Parental protein coverage: | 98.49 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | QVLVLDGRGHLLGR-LAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF |
QVLVLD..GHLLG..LAAIVA..VLLG.KVVVVRCEGINISGNFYRNKLKYLAF.RKRMNTNPSRGPYH. | |
Retrocopy | QVLVLDDGGHLLGP>LAAIVAN*VLLGWKVVVVRCEGINISGNFYRNKLKYLAFPRKRMNTNPSRGPYHL |
Parental | RAPSRIFWRT-VRGMLPHKTKRGQAALDRLKVFDGIPPPYDKR--MVVPAALKVVRLKPTR-FAYLGRLA |
.APSRIFW...VRG.LPH.TK.GQAALDRLKVFDGIPPPYDK...MVVP.A.KVVRLK.TR.FAYL.RLA | |
Retrocopy | LAPSRIFWHS<VRGLLPHETK*GQAALDRLKVFDGIPPPYDKKKPMVVPDAFKVVRLKLTRKFAYLERLA |
Parental | HEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
H..GWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRK.A.KNVEKK.DKYTEVLKTHGLLV | |
Retrocopy | HDGGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKRAKKNVEKKTDKYTEVLKTHGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |