RetrogeneDB ID: | retro_nleu_2280 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397341.1:3344762..3345161(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSNLEG00000011191 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.35 % |
Parental protein coverage: | 74.3 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MGILFTRIWRMFNHQEHKVIIV-GLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVI-NNTRFLMWDIG |
MGILF.R.WR.F....HKVII..GLDN....T.LYQ..MNE..H..PTIGSNVEE.V...NT.FLM.D.G | |
Retrocopy | MGILF-RMWRLFSYSQHKVIIF>GLDNSRSSTSLYQLFMNEDSHLFPTIGSNVEETVV>SNTYFLM*DTG |
Parental | GQESLRSSWNTYYTNTEFVIVV-VDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECM |
.QE.L..SW...........V.....T.RERISVTREELYK.LA....RK.G.LIFANKQ..K.CM | |
Retrocopy | VQEHLHFSWTLTMLTGFVIVVM>MVQTGRERISVTREELYKKLALVHPRKVGMLIFANKQGAK*CM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |