RetrogeneDB ID: | retro_chof_2470 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_783:44851..45185(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 78.76 % |
Parental protein coverage: | 62.57 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMW-DIGGQ |
GILFTRIWRLF.HQEHKV..VGLDNAGK.TILYQFSMNEVVHTSPTIGS.V.E....N.......DI.G. | |
Retrocopy | GILFTRIWRLFSHQEHKVTTVGLDNAGKPTILYQFSMNEVVHTSPTIGSDV-EEIVINNTRFLM>DICG* |
Parental | ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTKEELYKMLAHE |
.SL.SSWNTYYTNTEFVIVVVDSTDR..ISVT.EELYKMLAHE | |
Retrocopy | QSLHSSWNTYYTNTEFVIVVVDSTDRASISVTREELYKMLAHE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |