RetrogeneDB ID: | retro_chof_2131 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_52080:2071..2378(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 75.47 % |
Parental protein coverage: | 58.1 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MGILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDI-GG |
MGI.FTR.WRLF.HQEHKV.IVGLDNAGK.T.LYQFS.NEV.H.SPTIGSN.EEIVINNT.FL.....GG | |
Retrocopy | MGIFFTRLWRLFSHQEHKV-IVGLDNAGKATLLYQFSLNEVLHASPTIGSNEEEIVINNTHFLI*EM<GG |
Parental | QESLRSSWNTYYTNTEF-VIVVVDSTDRERISVTKE |
QESL.SSWN.YY.NTE..VIV.VDST..E.ISVT.E | |
Retrocopy | QESLLSSWNIYYINTEL<VIVIVDSTEKEIISVTGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |