RetrogeneDB ID: | retro_chof_1205 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_2247:10913..11247(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 68.7 % |
Parental protein coverage: | 63.13 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MGILFTRIWRLFNHQEHKVIIVGLDNAGKT-TILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIG- |
MG.L....W.LF..QEHKVIIVG.D.AGKT.TILYQF.M.EVVHTSP.IGSNV..IV...T.F.MWD.G. | |
Retrocopy | MGLLLAKLWSLFCNQEHKVIIVGPDTAGKT<TILYQFLMKEVVHTSPAIGSNVDKIVVKITSFQMWDTG< |
Parental | GQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTKEELYKMLAHE |
GQESLR.SWNTY..NTEF.I..VDS.D.E.I..TK.ELY.MLAHE | |
Retrocopy | GQESLRASWNTY*SNTEFIILAVDSIDKEQIAITK-ELYRMLAHE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |