RetrogeneDB ID: | retro_chof_857 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_15630:4043..4380(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 79.82 % |
Parental protein coverage: | 63.13 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MGILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQ |
MGIL.TR.WR.FNHQEHK.IIVGLDNAGKTTIL.QFSM..VVHTSPTIGSN.EE.VINN..FLMW.IG.Q | |
Retrocopy | MGILCTRKWRPFNHQEHKIIIVGLDNAGKTTILFQFSMSKVVHTSPTIGSNIEERVINNILFLMWEIGSQ |
Parental | ESLRSSWNT-YYTNTEFVIVVVDSTDRERISVTKEELYKMLAHE |
ESL.SS.NT...TNTEFVI.VVD.TDRERISVT.E.LYKMLA.E | |
Retrocopy | ESLHSSQNT>NDTNTEFVI-VVDHTDRERISVTRE*LYKMLARE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |