RetrogeneDB ID: | retro_chof_2081 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_47991:11774..12107(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 82.14 % |
Parental protein coverage: | 62.57 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | GILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQE |
GILFTRI.RLF.HQEH.VIIV.LDNAGKTT.LYQFS..EVVH.SPTIGS.VEE.VINNTRFLMWDIG.Q. | |
Retrocopy | GILFTRIRRLFSHQEHTVIIVRLDNAGKTTSLYQFSRSEVVHASPTIGSDVEERVINNTRFLMWDIGRQG |
Parental | SLRSSWNTYYTNTEFVIVVVDSTDRERISVTKEELYKMLAHE |
SL.SSW.TYYTNTE.VIVVVDSTD.ERISVT..ELYKM..HE | |
Retrocopy | SLHSSWDTYYTNTELVIVVVDSTDGERISVTR-ELYKM*VHE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |