RetrogeneDB ID: | retro_tbel_4665 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_97274:2048..2334(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSTBEG00000011511 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 63.92 % |
Parental protein coverage: | 53.93 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MRILFTRIWRPFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQ |
M.ILFTRIW..FN.QEHK..I..L.N...TTILYQFSMNEVVH.S.TIG.NVE....NNTRFL.W....Q | |
Retrocopy | MGILFTRIWKVFNCQEHKAFIMSLGNGDNTTILYQFSMNEVVHSSLTIGNNVE*RAINNTRFLIWVMACQ |
Parental | ESLRSSWNT-YYTNTEFVIVVVDSTDR |
E.L.SSWNT..YTN.E....VV.ST.R | |
Retrocopy | EFLCSSWNT>NYTNSE-PVIVVGSTER |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |