RetrogeneDB ID: | retro_chof_1132 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_20835:12452..12788(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 71.3 % |
Parental protein coverage: | 63.13 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MGILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRF-LMWDIGG |
MGILFTRI..LFN.QEH.VIIVGLD.AGKTTILYQFS.NEVV.TSP..G.NV.E....N..F.LMWDI.G | |
Retrocopy | MGILFTRIC*LFNQQEHRVIIVGLDIAGKTTILYQFSLNEVVNTSPKTGRNV-EEMVVNNMF>LMWDISG |
Parental | QESLRSSWNTYY-TNTEFVIVVVDSTDRERISVTKEELYKMLAHE |
QESL.SSWNT....N.EFVIV..D..DRE.ISVT.EELYK.L.HE | |
Retrocopy | QESLQSSWNTHL<SNPEFVIVAMDGRDREMISVTREELYKILRHE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |