RetrogeneDB ID: | retro_tbel_1540 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5038:455924..456330(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSTBEG00000011511 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 69.29 % |
Parental protein coverage: | 76.4 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MRILFTRIWRPFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVV-NNTRFLMWDIGG |
M.ILFTRI.R.FNHQEH..I..GLDNAGKT.I.YQFSMNEV.HTSPTIG.NVEE.VV..NTRFL.WDIGG | |
Retrocopy | MGILFTRI*RMFNHQEHEIIVIGLDNAGKTAIIYQFSMNEVAHTSPTIGINVEERVV<CNTRFLLWDIGG |
Parental | QESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAH-DLRKAG-LLIFANK-QDVKECMTVAE |
Q.SL.SS.NTY.TNT.FVI.VVD.TDRE.ISVTR.E.Y.MLAH.DLR.A...L....K.QD......V.E | |
Retrocopy | Q*SLCSS*NTYCTNTDFVI-VVDGTDREKISVTR-EFYEMLAHEDLRVAE<VLLISKKMQDCRRNLPVVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |