RetrogeneDB ID: | retro_tbel_3835 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_19502:0..269(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSTBEG00000011511 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 78.02 % |
Parental protein coverage: | 50.56 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MRILFTRIWRPFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVV-NNTRFLMWDIGG |
M.ILFTRI.R.FNHQEH..I..GLDNAGKT.I.YQFSMNEV.HTSPTIG.NVEE.VV..NTRFL.WDIGG | |
Retrocopy | MGILFTRI*RMFNHQEHEIIVIGLDNAGKTAIIYQFSMNEVAHTSPTIGINVEERVV<CNTRFLLWDIGG |
Parental | QESLRSSWNTYYTNTEFVIVV |
Q.SL.SS.NTY.TNT.FVIVV | |
Retrocopy | Q*SLCSS*NTYCTNTDFVIVV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |