RetrogeneDB ID: | retro_chof_1712 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_36516:917..1205(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 82.65 % |
Parental protein coverage: | 53.63 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MGILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNVEEIVINNTRFLMWDI-G |
MGIL.TRIWRLFNHQEHKVIIVGLD.AGKTT.LYQFSM.EVVHT..PTIGSNVEE.V.N.T.FL.WDI.G | |
Retrocopy | MGILLTRIWRLFNHQEHKVIIVGLDDAGKTTVLYQFSMDEVVHT<TPTIGSNVEETVVNSTCFLIWDI>G |
Parental | GQESLRSSWNTYYTNTEFVIVVVDSTDR |
GQESL.SSWN.YYTNTEFVIV.VDST.. | |
Retrocopy | GQESLHSSWNIYYTNTEFVIVAVDSTEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |