RetrogeneDB ID: | retro_chof_836 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_154342:1183..1518(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 73.28 % |
Parental protein coverage: | 63.13 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MGILFTRIWRLF-NHQEHKVIIVGLDN-AGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDI- |
MGI.FTRIWRLF..HQEHKV..VGLD..AGKTTILYQFS.NEV.H.SPTIGSN.EEIVIN.T.FL.W... | |
Retrocopy | MGIFFTRIWRLF>SHQEHKVSTVGLDM<AGKTTILYQFSLNEVPHASPTIGSNEEEIVINSTHFLIWEM< |
Parental | GGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTKEELYKMLAHE |
GGQESL.SSWN.YYTNTE.VIV.VD....E.ISVT..ELYK...HE | |
Retrocopy | GGQESLLSSWNIYYTNTEIVIVIVDIKYKEMISVT-GELYKISTHE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |