RetrogeneDB ID: | retro_lafr_1178 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_81:4733648..4734091(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSLAFG00000032104 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.81 % |
Parental protein coverage: | 82.68 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | ILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISV |
ILYQFSM.EV..T.P..GSNVEEIVVN...FLMW.IG.Q.SL.SS.NTY.T.TEFVIVVVDST.RER.S. | |
Retrocopy | ILYQFSMTEVILTPPIVGSNVEEIVVNHIHFLMWNIGCQGSLHSSGNTYSTKTEFVIVVVDSTGRERVSG |
Parental | TREELYKMLAHEDLRKAGLLIFANKQDVK-ECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLE |
TREEL.K..AH..LRKA..LIFA.K.DVK..CM...EISQFLKLT..KD.Q.HIQACCAL.GEGL.Q.LE | |
Retrocopy | TREELCKPSAHKYLRKA*MLIFASKKDVK<KCMNITEISQFLKLTYLKDQQLHIQACCALPGEGLLQRLE |
Parental | WMMSRLKIR |
WMMS..KIR | |
Retrocopy | WMMSEFKIR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |