RetrogeneDB ID: | retro_chof_1407 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_284292:1187..1458(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSCHOG00000005062 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 76.6 % |
Parental protein coverage: | 51.4 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | FTRIWRLF-NHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVI-NNTRFLMWDIGGQES |
FTRI.RL..NHQEH..IIVGL.NAGKTTILYQFSMNEV.HTSP.IG..V.E.VI..N.RFLM.D.GGQES | |
Retrocopy | FTRIRRLA<NHQEHNIIIVGLGNAGKTTILYQFSMNEVIHTSPKIGRKV-EKVI<YNPRFLMGDTGGQES |
Parental | LRSSWNTYYTNTEFVIVVVDSTDR |
L.SS.NTY.TNTEFVIVVVDST.. | |
Retrocopy | LHSSLNTYCTNTEFVIVVVDSTEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |