Parental gene:

CDC42, ENSVPAG00000006919

Aliases:None
Description:cell division cycle 42 [Source:HGNC Symbol;Acc:1736]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_3624:178226..193644(+)


>ENSVPAG00000006919
ATGCAGACAATTAAGTGCGTTGTTGTGGGTGATGGTGCCGTTGGTAAAACATGTCTCCTGATATCCTACACAACAAACAA
ATTTCCATCTGAGTATGTACCGACTGTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAGCCATATACTCTTG
GACTTTTTGATACTGCAGGGCAGGAGGATTATGACAGATTACGACCGCTGAGTTATCCACAAACAGATGTATTTCTAGTC
TGTTTTTCAGTGGTCTCTCCATCCTCATTTGAAAATGTGAAAGAAAAGTGGGTGCCTGAGATAACTCACCACTGTCCAAA
GACTCCTTTCTTGCTTGTTGGGACCCAAATTGATCTCAGAGATGACCCCTCTACCATTGAGAAACTTGCCAAGAATAAAC
AGAAGCCTATCACTCCAGAGACTGCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAGTATGTGGAGTGTTCTGCACTC
ACACAGAGAGGTCTGAAGAATGTGTTTGATGAGGCTATCCTAGCTGCCCTCGAGCCTCCGGAAACTCAACCCAAAAGGAA
GTGCTGTATATTCTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014707 possible_ortholog 5 retrogenes
retro_cfam_1587, retro_cfam_1970, retro_cfam_2189, retro_cfam_88, retro_cfam_89,
Choloepus hoffmanni ENSCHOG00000005306 ortholog_one2one 10 retrogenes
retro_chof_103, retro_chof_1044, retro_chof_1195, retro_chof_1853, retro_chof_2055, retro_chof_2105, retro_chof_2331, retro_chof_2407, retro_chof_50, retro_chof_800,
Callithrix jacchus ENSCJAG00000005912 possible_ortholog 6 retrogenes
retro_cjac_1275, retro_cjac_1808, retro_cjac_1826, retro_cjac_2251, retro_cjac_751, retro_cjac_911,
Cavia porcellus ENSCPOG00000006543 possible_ortholog 4 retrogenes
retro_cpor_1168, retro_cpor_286, retro_cpor_33, retro_cpor_887,
Echinops telfairi ENSETEG00000004443 possible_ortholog 1 retrogene
retro_etel_2010,
Felis catus ENSFCAG00000004853 possible_ortholog 4 retrogenes
retro_fcat_129, retro_fcat_1421, retro_fcat_1579, retro_fcat_896,
Macaca mulatta ENSMMUG00000022009 possible_ortholog 8 retrogenes
retro_mmul_1449, retro_mmul_1612, retro_mmul_1685, retro_mmul_1900, retro_mmul_1932, retro_mmul_24, retro_mmul_349, retro_mmul_598,
Monodelphis domestica ENSMODG00000016078 possible_ortholog 3 retrogenes
retro_mdom_18, retro_mdom_181, retro_mdom_537,
Mustela putorius furo ENSMPUG00000015999 ortholog_one2one 2 retrogenes
retro_mputfur_308, retro_mputfur_957,
Nomascus leucogenys ENSNLEG00000008198 ortholog_one2one 4 retrogenes
retro_nleu_2029, retro_nleu_2949, retro_nleu_3007, retro_nleu_679,
Oryctolagus cuniculus ENSOCUG00000009986 possible_ortholog 1 retrogene
retro_ocun_60,
Sorex araneus ENSSARG00000005184 possible_ortholog 3 retrogenes
retro_sara_10, retro_sara_220, retro_sara_3,
Ictidomys tridecemlineatus ENSSTOG00000000805 possible_ortholog 4 retrogenes
retro_itri_1158, retro_itri_1602, retro_itri_1615, retro_itri_431,
Vicugna pacos ENSVPAG00000004859 within_species_paralog 2 retrogenes
retro_vpac_574, retro_vpac_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_13 59.47 99.48
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2. retro_vpac_451 54.55 51.31
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3. retro_vpac_542 52.53 51.31
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Download FASTA sequences of all ENSVPAG00000006919 retrocopies