RetrogeneDB ID: | retro_chof_149 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_3363:108069..108461(-) | ||
Located in intron of: | ENSCHOG00000008069 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004703 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.61 % |
Parental protein coverage: | 86.18 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | MKFNPFVTSDRSKNRKRHFNAPS-HIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGH-YKGQQIG |
MKF.PFVTSD.SKN.KRHF...S.HI.RKI.SSPLSK.LRQKYN..SMPI.KDDEVQ.V.GH..KGQQIG | |
Retrocopy | MKFSPFVTSDWSKNCKRHFSVLS<HIHRKILSSPLSKDLRQKYNI*SMPIQKDDEVQIV*GH>KKGQQIG |
Parental | KVVQV-YRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKE |
KVVQV.YRKK.VIYIE.VQ.EKA..TTVHVGIHPS.VVITRLKL.KD..KILE.KAKS..VGKE | |
Retrocopy | KVVQV<YRKKSVIYIEQVQ*EKASDTTVHVGIHPSRVVITRLKLNKDCEKILEHKAKSHKVGKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |