RetrogeneDB ID: | retro_chof_2147 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_53407:6894..7285(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004703 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60.58 % |
Parental protein coverage: | 86.84 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 5 |
Parental | MKFNPFVTSDRSKNRKR-HFNAPSHIRRKIMSSPLSKELRQKYNVR-SMPIRKDDEVQV-VRGHYKGQQI |
M.F.PF.TSD..KN..R..F..P.HI.RK.M..PLSKEL..KYNV..S.PI.KD......V.GHYKGQQI | |
Retrocopy | MEFSPFLTSDWRKNHER<DFSSPFHIHRKSMFFPLSKELSLKYNVD<SFPI*KDYKFRM<VQGHYKGQQI |
Parental | GKVVQVYR-KKYVIYIERVQREKANGTTV-HVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEK |
GKVV.VYR.K.Y..Y.E....EKANGTT....GI.PSKVVI.RLKLDKD.K.IL...AKS....KEK | |
Retrocopy | GKVVRVYR<KEYAVYVEHMKWEKANGTTA<PWGIRPSKVVISRLKLDKDYKTILKCNAKSHEIEKEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |