RetrogeneDB ID: | retro_chof_2333 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_66690:2133..2546(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004703 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.93 % |
Parental protein coverage: | 90.79 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNV.SMPI.KDDEVQVVR.HYKGQQIGKV | |
Retrocopy | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVQSMPI*KDDEVQVVREHYKGQQIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD-RKKILERKAKSRQVGKEKNIRKKQ |
VQVYRK.YVIYIE.VQREKANGTTVHVGIHPSKVVITRLKLDK..RKKIL.RKAKS.QVGKEK...K.. | |
Retrocopy | VQVYRKQYVIYIEQVQREKANGTTVHVGIHPSKVVITRLKLDKG<RKKILKRKAKSSQVGKEKGKYKEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |