RetrogeneDB ID: | retro_chof_1893 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_41675:6456..6903(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004703 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.23 % |
Parental protein coverage: | 98.68 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
.KFN..V.S..SKN.K.HFNAPSHI.RKIMSSP.SKE.RQK..V.SMPI.K.DEV.VVRGH.K..Q.GKV | |
Retrocopy | VKFNLCVASNQSKNHKSHFNAPSHICRKIMSSPFSKEPRQKFSVQSMPIQKGDEVHVVRGHNKEHQMGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDR-KKILERKAKSRQVGKEKNIRKKQL |
VQVYRKK.VI.I.RVQ...ANG..VHVGIH.SKVVITRL.....R..K.L..KA......K..N.RKKQL | |
Retrocopy | VQVYRKKGVIHI*RVQQ*LANGNSVHVGIHSSKVVITRLNKTG*RLPKMLKVKAM*ER--KRANTRKKQL |
Parental | RRCRNKRIFCS |
RRC.NKRIFC. | |
Retrocopy | RRCMNKRIFCT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |