RetrogeneDB ID: | retro_chof_2276 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_62836:4421..4809(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004703 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.92 % |
Parental protein coverage: | 86.18 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | MKFNPFVTSDRSKN-RKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEV-QVVRGHYKGQQIG |
MKF.P.VTSD.SKN.RKRHF..PSHI.RKI...PL.K.LRQK.NV..M.I.KDD.V.QVV.GHYK.QQIG | |
Retrocopy | MKFIPIVTSD*SKN<RKRHFKVPSHICRKIVF-PLPK*LRQKCNVQYMFIQKDDKV<QVV*GHYKAQQIG |
Parental | KVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKE |
.VVQ..RKK.VI.IE.VQ.EKANGTTVH..I.PS..V...LKLD..RKKILE..AK...V.KE | |
Retrocopy | GVVQIDRKKRVIHIE*VQHEKANGTTVHMSIQPSNGVSPVLKLDNNRKKILEHRAKYH*VWKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |