RetrogeneDB ID: | retro_mputfur_242 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896899.1:19232130..19232597(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSMPUG00000010468 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 97.45 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV | |
Retrocopy | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
Parental | LRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRH- |
LRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLK.YKVDENGKISRLRRECPSDECGAG.FMASH.DRH. | |
Retrocopy | LRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLK*YKVDENGKISRLRRECPSDECGAGDFMASHLDRH< |
Parental | YCGKCCLTYCFNKPEDK |
YCGKCCLTYCFNKPEDK | |
Retrocopy | YCGKCCLTYCFNKPEDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |