RetrogeneDB ID: | retro_meug_94 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_2087:34817..35282(+) | ||
Located in intron of: | ENSMEUG00000016507 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSMEUG00000008917 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 82.28 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIF.KTL.GKTIT.EV.PSDTIENVK.KI.DKEGIPPDQQRLIFAGKQLE.G.T.SDYNIQKESTLHL. | |
Retrocopy | MQIFIKTLRGKTITPEVKPSDTIENVKTKIPDKEGIPPDQQRLIFAGKQLEGGCTFSDYNIQKESTLHLL |
Parental | LRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFM-ASHFDRH |
LRL.GGAK.R.KKSYTTPK.NKH.RKKV.L..LKY.KVDE.GKIS.LRRECPSDE.GAGV...ASHFDRH | |
Retrocopy | LRLHGGAKNR-KKSYTTPKNNKHERKKVNLRLLKYHKVDEIGKISHLRRECPSDEYGAGVLQ<ASHFDRH |
Parental | YCGKCCLT-YCFNKPEDK |
YCGKCCL..Y.FNKPEDK | |
Retrocopy | YCGKCCLN>Y*FNKPEDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |