RetrogeneDB ID: | retro_amel_661 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192556.1:572905..573327(+) | ||
Located in intron of: | ENSAMEG00000011719 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSAMEG00000004017 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.56 % |
Parental protein coverage: | 91.67 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKK |
TL..EPSDT.E..KAKIQ.KEGIPPDQQRLIF.G.Q.ED.RT....NIQKESTLHL.LRL.GGAKKR.KK | |
Retrocopy | TLQDEPSDTTEIAKAKIQNKEGIPPDQQRLIFVGEQREDRRTFI*HNIQKESTLHLWLRLHGGAKKR-KK |
Parental | SYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDEC-GAGVFMASHFDRHYCGKCCLTYCFNK |
SYTTPKKNKHKRKK.KLAVLKYYKVDENGKIS.L...CPSDEC..AGVFMASHFDRHY..K.CLTYCFNK | |
Retrocopy | SYTTPKKNKHKRKKAKLAVLKYYKVDENGKISHLHQKCPSDEC<CAGVFMASHFDRHYYDK-CLTYCFNK |
Parental | PEDK |
PE.K | |
Retrocopy | PENK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |