RetrogeneDB ID: | retro_itri_1765 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393733.1:193521..193885(+) | ||
Located in intron of: | ENSSTOG00000022577 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000009566 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.29 % |
Parental protein coverage: | 78.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN |
TIEN.KAKIQ.KEGIPPDQQ.LIFAGKQLEDGRTLSDYNI.KESTLHLVLRL.G.AKKRK.KSYTTPKKN | |
Retrocopy | TIENIKAKIQNKEGIPPDQQSLIFAGKQLEDGRTLSDYNI*KESTLHLVLRLHGSAKKRKNKSYTTPKKN |
Parental | KHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECG-AGV-FMASHFDRHYCGK |
KHKRKK.KLAVLKYYKVDEN..IS.L..ECPSDECG..GV.FMASHFDRHYC.K | |
Retrocopy | KHKRKKIKLAVLKYYKVDENSQISCLLCECPSDECG<CGV<FMASHFDRHYCCK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |