RetrogeneDB ID: | retro_mluc_1865 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429932:998271..998734(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000029941 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSMLUG00000017064 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.34 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD-YNIQKESTLHL |
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP.QQRL.FAGKQL.DG.TLSD..NIQKESTL.L | |
Retrocopy | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPHQQRLVFAGKQLADGHTLSD<LNIQKESTLPL |
Parental | VLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRREC-PSDECGAGVFMASHFDR |
VLRL.GGAKKRKK.SYT.PKKNKH.RKKVKLA.LKYYKVDE.GKISRL.RE..PSDECG..VFMASHFDR | |
Retrocopy | VLRLCGGAKKRKKQSYTAPKKNKHQRKKVKLAILKYYKVDEKGKISRLLRES<PSDECGR-VFMASHFDR |
Parental | HYCGKCCLTYCFNKPEDK |
HYC.KCCLTYCFNKPED. | |
Retrocopy | HYCDKCCLTYCFNKPEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |