RetrogeneDB ID: | retro_itri_1583 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393554.1:403564..403852(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000009566 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.66 % |
Parental protein coverage: | 62.18 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LTGKTITLEVEPSDTIENVKAKIQ-DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG |
L.GKT..L..EP.D.IENVK.KI...KEGIP.DQQRLI..GKQ.EDG.TLSDY...K..TLHL..RL.GG | |
Retrocopy | LAGKTVMLKAEPLDAIENVKVKIP>NKEGIPSDQQRLISVGKQREDGWTLSDYDMEKQPTLHLEPRLCGG |
Parental | AKKRKKKSYTTPKKNK-HKRKKVKLAVLK |
.KKR..KS.T.PKKN....RKKVKLA.LK | |
Retrocopy | GKKR-NKS*TAPKKNS<PRRKKVKLAILK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |