RetrogeneDB ID: | retro_sara_208 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_7133:109198..109610(+) | ||
Located in intron of: | ENSSARG00000000269 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000005798 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.39 % |
Parental protein coverage: | 91.33 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSD-RSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGK |
MKFN.FVTS..R...........SH.........LSKELRQKYNV.SMPI.KD.EVQVVRGHYKGQQIGK | |
Retrocopy | MKFNHFVTSH>RARTLETFQCTVSHL*EDYVFPLLSKELRQKYNVQSMPIQKDNEVQVVRGHYKGQQIGK |
Parental | VVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKK |
VVQ.Y..KYVIYIE..Q.EKAN.TTVHVGIHP.KVVITRLKL..D.KKILERK.K.RQ.GK.K...K. | |
Retrocopy | VVQAYKNKYVIYIE*IQWEKANVTTVHVGIHPGKVVITRLKLN*DCKKILERKTKARQAGKKKGKYKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |