RetrogeneDB ID: | retro_sara_273 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_142371:3796..4147(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000005798 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 51.18 % |
Parental protein coverage: | 82.67 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | SKNRKRHFNAPSHIRRKIMS-SPLSKELRQKYNVRSMPIRKDDE-VQVVRGHYKGQQIGKVVQVYRKKYV |
S.N..RH.....HIRRK.MS.SP..K....KY.V.S.PI.K..E.V..V.GHYKG...GK..Q...KKY. | |
Retrocopy | SNNHRRHV----HIRRKAMS<SPVPKSQDKKYIV*SRPIQKGCE<VRAVEGHYKGKDSGKAAQANKKKYT |
Parental | IYIERVQREKA-NGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIR |
IY...VQRE.A.NGTTVH.GIH..K.VIT...LDK.RKK.L.............NIR | |
Retrocopy | IY-TNVQREEA<NGTTVHTGIHLRK-VITG*ELDKHRKKVLSAEPTCKEGKERVNIR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |