RetrogeneDB ID: | retro_sara_641 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_248932:55953..56370(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000005798 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.52 % |
Parental protein coverage: | 91.33 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVR-GHYKGQQIGK |
MKFNPFVTSD.SKN.KRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVR.GHYKGQQIGK | |
Retrocopy | MKFNPFVTSDQSKNHKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVR<GHYKGQQIGK |
Parental | VVQVYRKKYVIYIERV-QR-EKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQV---GKEKNI |
VVQVYRKKY.IYIERV.QR.EKANGTTVHVGIHPSKVVITRL.LDK.R...L.R.....QV...GK...I | |
Retrocopy | VVQVYRKKYFIYIERV<QR<EKANGTTVHVGIHPSKVVITRLNLDKGRXXXLARIGITEQVCRVGKTMTI |
Parental | RKK |
..K | |
Retrocopy | KGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |