RetrogeneDB ID: | retro_sara_656 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_253930:59027..59378(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000005798 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.29 % |
Parental protein coverage: | 78. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MKFNPFVT-SDRSK-NRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIG |
.KFNPFV...DR.K.NRK.HF.AP.H.RRKIMS.PL.KELRQK.NV.S....KDDEVQVV..HY..QQ.. | |
Retrocopy | LKFNPFVI<LDRPK<NRKHHFKAPLHVRRKIMSQPLCKELRQKHNVCSVRNLKDDEVQVV*EHYESQQVE |
Parental | KVVQV-YRKKYVIYIERVQREKANGT-TVHVGIHPSKVVITRLKLDKDRKK |
KVVQV.YRKKYVIYIERVQREK.N.....HVGI..S.VVI.R.K......K | |
Retrocopy | KVVQV>YRKKYVIYIERVQREKVNSN>AIHVGIQSSYVVIDRAKTETEMRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |