RetrogeneDB ID: | retro_sara_740 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_61443:149..559(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000005798 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.86 % |
Parental protein coverage: | 91.33 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVR-GHYKGQQIGK |
MKFNPFVTS.RSKNRKRHFNAPSHIRRKIMSSPLSKELRQK.NV.SMPIRKDDEVQVVR.G.YK.QQIGK | |
Retrocopy | MKFNPFVTSERSKNRKRHFNAPSHIRRKIMSSPLSKELRQKCNVQSMPIRKDDEVQVVR<GYYKDQQIGK |
Parental | VVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKK |
VVQVYRKKYVIYIERV.REKANGTTVHVG.HPSKVVITRLKLDKD.KKILERKAKS.QVGKEK...K. | |
Retrocopy | VVQVYRKKYVIYIERV*REKANGTTVHVGVHPSKVVITRLKLDKDHKKILERKAKSSQVGKEKGKYKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |