RetrogeneDB ID: | retro_sara_578 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_235417:47014..47316(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000005798 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 59.8 % |
Parental protein coverage: | 67.33 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | SPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYR-KKYVIYIERVQREKANGTTVHVGIH |
SPL.KEL.QKYNV.SM.I..DD.V....G.YKGQQI.K.VQVYR..KYV.....VQ.EK.NGT.V...I. | |
Retrocopy | SPLPKELKQKYNVQSMVI*RDDKVKFIQGYYKGQQIDKEVQVYR<DKYVKCTQ*VQ*EKENGTNVLINIW |
Parental | PSKVVITRLKLDKDRKKILERKAKSRQVGKEK |
.S...IT.LKLDKD.KKILE...KS...GK.K | |
Retrocopy | SSMMIITKLKLDKDCKKILEYEVKSCKIGKGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |