RetrogeneDB ID: | retro_tsyr_2001 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_77466:7849..8218(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 66.93 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAPAKKGG-EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLN |
MAP.KKGG...KKG.SAI.EVVT.EYT.N.HK..H.V.FKKRAP..LKEI.KFAMKE...PDV.IDTRLN | |
Retrocopy | MAPTKKGG<QMKKGHSAITEVVT*EYTMNVHKCNHRVDFKKRAPWTLKEIQKFAMKEKRDPDVLIDTRLN |
Parental | KAVWAKGIRNVPYRIRVRLS-RKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
KAVWAKG.RNVP..I.V............S.NKLYTLVT.VPVTT.KNL.TV.V.EN | |
Retrocopy | KAVWAKGLRNVPNCIGVTVQ>KHHEDEDSS-NKLYTLVTCVPVTTLKNL-TVRVNEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |