Parental gene:

ENSSTOG00000010902

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393471.1:86867..91263(-)


>ENSSTOG00000010902
ATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTCGTGACCCGGGAATACACCAT
CAACATTCACAAGCGCATCCATGGAGTGGGTTTCAAGAAGCGTGCTCCTCGGGCCCTCAAAGAGATCCGGAAATTTGCCA
TGAAAGAGATGGGAACTCCAGATGTGCGCATTGATACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTC
CCATATCGTATTCGTGTGCGATTATCCAGAAAACGTAACGAGGATGAAGATTCACCAAACAAGCTCTATACTTTGGTAAC
CTATGTCCCCGTTACCACGTTCAAAAATCTACAGACAGTCAATGTGGATGAGAACTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007914 possible_ortholog 1 retrogene
retro_acar_168,
Bos taurus ENSBTAG00000019701 ortholog_one2one 9 retrogenes
retro_btau_1043, retro_btau_1100, retro_btau_1553, retro_btau_160, retro_btau_1777, retro_btau_1783, retro_btau_409, retro_btau_524, retro_btau_867,
Latimeria chalumnae ENSLACG00000013603 ortholog_one2many 1 retrogene
retro_lcha_94,
Macropus eugenii ENSMEUG00000000963 ortholog_one2many 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Monodelphis domestica ENSMODG00000001704 possible_ortholog 5 retrogenes
retro_mdom_1052, retro_mdom_1464, retro_mdom_1674, retro_mdom_1720, retro_mdom_1818,
Oryctolagus cuniculus ENSOCUG00000002392 possible_ortholog 9 retrogenes
retro_ocun_1070, retro_ocun_1074, retro_ocun_1161, retro_ocun_117, retro_ocun_1366, retro_ocun_206, retro_ocun_64, retro_ocun_941, retro_ocun_99,
Sarcophilus harrisii ENSSHAG00000011706 possible_ortholog 3 retrogenes
retro_shar_190, retro_shar_285, retro_shar_721,
Tarsius syrichta ENSTSYG00000005427 ortholog_one2one 33 retrogenes
retro_tsyr_1102, retro_tsyr_117, retro_tsyr_1211, retro_tsyr_1535, retro_tsyr_1610, retro_tsyr_1692, retro_tsyr_1861, retro_tsyr_1912, retro_tsyr_1947, retro_tsyr_2001, retro_tsyr_2026, retro_tsyr_2030, retro_tsyr_2079, retro_tsyr_2089, retro_tsyr_2092, retro_tsyr_2100, retro_tsyr_2105, retro_tsyr_2162, retro_tsyr_239, retro_tsyr_294, retro_tsyr_485, retro_tsyr_551, retro_tsyr_596, retro_tsyr_617, retro_tsyr_635, retro_tsyr_666, retro_tsyr_712, retro_tsyr_754, retro_tsyr_766, retro_tsyr_780, retro_tsyr_785, retro_tsyr_813, retro_tsyr_909,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_76 86.09 92.00
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2. retro_itri_298 82.14 88.80
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3. retro_itri_450 58.04 86.40
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4. retro_itri_680 83.87 96.00
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5. retro_itri_1068 60.71 86.40
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6. retro_itri_1074 64.80 98.40
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7. retro_itri_1077 58.51 73.60
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8. retro_itri_1140 58.47 92.80
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9. retro_itri_1142 53.91 88.80
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10. retro_itri_1223 94.40 100.00
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11. retro_itri_1467 60.22 73.60
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12. retro_itri_1570 67.96 81.60
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13. retro_itri_1634 58.76 77.60
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14. retro_itri_1791 88.12 80.80
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15. retro_itri_1900 61.90 81.60
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Download FASTA sequences of all ENSSTOG00000010902 retrocopies