RetrogeneDB ID: | retro_itri_1223 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393406.1:1623314..1623689(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000024015 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.4 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
MAPAKKGGEKKKG.SAINEVVTREYTINIHKRIHGVGFKKRA.RALKEI.KFAMKEMGTPDVRIDTRLNK | |
Retrocopy | MAPAKKGGEKKKGPSAINEVVTREYTINIHKRIHGVGFKKRALRALKEIQKFAMKEMGTPDVRIDTRLNK |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
AVWAK.IRNVPYRIRV.LSRK.NEDEDSPNKLYTLVTYVP.TTFKNLQTVNVDEN | |
Retrocopy | AVWAKRIRNVPYRIRVQLSRKHNEDEDSPNKLYTLVTYVPITTFKNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |