RetrogeneDB ID: | retro_tsyr_2100 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_906:17632..17865(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 71.6 % |
Parental protein coverage: | 64. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | INEVVTREYT-INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIR |
I..V.T.E.T.INIHKRI.G.GFKK..PRALKEI.KFAMK...TPD..IDTRLNK.VWAKGI.NVP..I. | |
Retrocopy | ITQVMT*EHT<INIHKRIKGMGFKKHVPRALKEIQKFAMKDLETPD--IDTRLNKVVWAKGIKNVPDHIH |
Parental | VRLSRKRNEDE |
V.LSRK.NEDE | |
Retrocopy | V*LSRKCNEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |