RetrogeneDB ID: | retro_tsyr_551 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_138825:562..892(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 53.85 % |
Parental protein coverage: | 93.6 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIR |
EKKKG.SAINEVVT....I..HK.I..V.FKK.A....KEI.KF..KEMG..DV.IDTRL.K....KG.. | |
Retrocopy | EKKKGCSAINEVVTQVGIIKVHKHI*RVTFKKCAHQTIKEIWKFIIKEMGIADVCIDTRLSKTI*TKGMS |
Parental | NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
.VPY.I............D....L.T.VT...VTTFKNL.TVNVD.N | |
Retrocopy | KVPYHIH----NEDEDSPDKLYTLVTYVT---VTTFKNLMTVNVDKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |