RetrogeneDB ID: | retro_tsyr_617 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_151503:2622..2993(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 72.44 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHK-RIHGVGFKKRAPRALKEIRKF-AMKEMGTPDVRIDTRL |
MAP.KK.G..KKG...INEV.T.EYTIN.HK..IHGV...KRAPRALKE.....A.KEM.TPDV..DTR. | |
Retrocopy | MAPTKKDG--KKGCFTINEVMTQEYTINTHK>HIHGVNLRKRAPRALKEXXXX>AIKEMETPDVCSDTRF |
Parental | NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
N..VWAKG.RNVP.RI.V.LSRKRNEDEDSPNKLYTLVT..PVTTFKNL.TVN.DEN | |
Retrocopy | NNTVWAKGVRNVPHRICVQLSRKRNEDEDSPNKLYTLVTQGPVTTFKNL*TVNMDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |