RetrogeneDB ID: | retro_itri_1570 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393548.1:1831051..1831347(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.96 % |
Parental protein coverage: | 81.6 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINI-HKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLN |
MAPA..G.EKK.G.SA.N.V.T..YTINI.HKRI.GVGFK..A..ALK.I.KFAMKEMGT.DVR...... | |
Retrocopy | MAPAQQGDEKK-GCSALNKVQTWVYTINI<HKRICGVGFKRCALWALKAI*KFAMKEMGTLDVRLIPG-S |
Parental | KAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKL |
.AVWAKG.RNVP.RIRV.LSRK..EDEDSPN.. | |
Retrocopy | TAVWAKGTRNVPCRIRVLLSRK-GEDEDSPNSI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |