RetrogeneDB ID: | retro_tsyr_909 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_236956:449..762(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 61.82 % |
Parental protein coverage: | 84.8 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | SAINEVVTREYTINIHKRIHGVGFK-KRAPR-ALKEIRKFAMKEM-GTPDVRIDTRLNKAVWAKGIRNVP |
SAI.EVV.R..T.NIHK.IHG...K...APR.AL.E..KF.M....GTPDV..DTRLNK.V..KG.RN.P | |
Retrocopy | SAISEVVIRQST-NIHKHIHGMHVK<ETAPR<ALSETQKFTMISR>GTPDVCTDTRLNKGV*DKGRRNIP |
Parental | YRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK-NLQTV |
.......SRK.NE.EDSP.KL.TLVTYVPVTTFK.NLQ.. | |
Retrocopy | NPVCLAMSRKYNEREDSPHKL*TLVTYVPVTTFK<NLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |