RetrogeneDB ID: | retro_tsyr_1947 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_70855:2278..2650(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 84.68 % |
Parental protein coverage: | 99.2 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | APAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA |
AP.KKG.EKKK.RSAINEVVT.EYTINIHKRIHGVGFK..APRALKEI.KFAMKE.GTPD.R.DTRLNKA | |
Retrocopy | APTKKGREKKKSRSAINEVVTQEYTINIHKRIHGVGFKNCAPRALKEI*KFAMKETGTPDIRFDTRLNKA |
Parental | VWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
V..KGIRNVPYRI..RLSRK.NEDEDSPNKL.TLV.YVPVTTFKNL.TV.VDEN | |
Retrocopy | VQDKGIRNVPYRIHPRLSRKQNEDEDSPNKL*TLVAYVPVTTFKNL*TVIVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |