RetrogeneDB ID: | retro_itri_1077 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393369.1:3580197..3580473(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.51 % |
Parental protein coverage: | 73.6 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | APAKKGGEKKK-GRSAINEVVTREYTINIHKRIHGVGFKKRAPRA-LKEIRKFAMKEMGTPDVRIDTRLN |
AP..KGG.KK..G..AI..VVT..YT..IH.....VGF.K..P...LKEI.KFAM...GTPDV...TRLN | |
Retrocopy | APSNKGGKKKM<GHPAISKVVTPAYTTDIHNPNQRVGFRKSSPSG>LKEIHKFAMRGIGTPDVFNNTRLN |
Parental | KAVWAKGIRNVPYRIRVRLSRKRN |
KA.W.KGIRNVP.R..V.LSRK.. | |
Retrocopy | KAAWTKGIRNVPSRSHVQLSRKKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |