RetrogeneDB ID: | retro_tsyr_2105 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_91449:2478..2835(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 61.79 % |
Parental protein coverage: | 96. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRI-HGV-GFKKRAPRALKEIRKFAMKEMG-TPDVRIDTR |
MAP..K..EKKKG.SAINEVVT.EY.INI.....HG..GFK...P.A..EIRK..MKEMG.TPDV...TR | |
Retrocopy | MAPSEKDREKKKGHSAINEVVT*EYSINIRHAT<HGA<GFKNHDPQAFREIRKLTMKEMG<TPDVCMTTR |
Parental | LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
.NKA.W.KGI..VP..I.V..S.K...DE.SPN..YTLVTY..VTT.KNLQT. | |
Retrocopy | RNKAGWSKGITDVPRYICVQFS*KDDQDEESPNNFYTLVTYISVTTLKNLQTM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |