RetrogeneDB ID: | retro_itri_450 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393292.1:7308165..7308480(-) | ||
Located in intron of: | ENSSTOG00000012447 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.04 % |
Parental protein coverage: | 86.4 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRAL-KEIRKFAMKE-MGTPDVRIDTRLNKAVWAKGI |
KK.G....NEVVT.EYTINIHK.IH..G.K..AP.AL.KEI.KF..KE.MG.PDV...TR.NK..W..GI | |
Retrocopy | KKGGKKGLNEVVTQEYTINIHKYIHEEGLKYNAPWAL>KEIQKFSTKE>MGSPDV--FTRPNKVIWDTGI |
Parental | RNVPY-RIRVRLSRKRN-EDEDSPNKLYTLVTYVPVTTFKNL |
.NVPY....V.L.RK...E.E.SPN.L.T.VT..P..TF.NL | |
Retrocopy | WNVPY<HTHVQLLRKLR<EEE-SPNNLHTFVTCIPIITF*NL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |