RetrogeneDB ID: | retro_itri_1467 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393498.1:684318..684593(+) | ||
Located in intron of: | ENSSTOG00000004266 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60.22 % |
Parental protein coverage: | 73.6 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSR |
.T.EYTI...K.IH.V.F.K.AP..L.EI.K.A.K.MGTPDV..D.RLNKAVWAKGI.N.P..I.V.LS. | |
Retrocopy | LTPEYTIYNYKHIHRVSFQKLAPWVLQEIQKYATKKMGTPDVPTDSRLNKAVWAKGIKNAPHHIHVGLST |
Parental | KRNEDEDS-PNKLYTLVTYVPVT |
K.NE..DS...KLYTLVT.V... | |
Retrocopy | KQNEEGDS<TKKLYTLVTDVTIS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |