RetrogeneDB ID: | retro_tsyr_239 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_603:68110..68478(-) | ||
Located in intron of: | ENSTSYG00000013399 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 78.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
MAPA.KGGEK..GRSAINEV.T.E.TI.IHKRIHGVGFKKRAPRALKEIRKFAMK..GTPDV..DTRLN. | |
Retrocopy | MAPAGKGGEKQQGRSAINEVATGEHTIDIHKRIHGVGFKKRAPRALKEIRKFAMKQVGTPDVCTDTRLNE |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNK-LYTLVTYVPVTTFKNLQTVNVDEN |
AVWAKGIRNVPYRI.VRLS..R...ED........LV.YVPVTTFKNLQTVNVDEN | |
Retrocopy | AVWAKGIRNVPYRIHVRLS--RKRNEDEDSP<KQALVAYVPVTTFKNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |