RetrogeneDB ID: | retro_tsyr_1692 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_545305:424..797(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 71.65 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MAPAKKGGEKKKG-RSAINEVVTREYTI-NIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL |
MAP.KKG.EKKKG..SA.N..VT.EYT...IHK..H.V.FKK.AP.ALK.I.K.AMKEMGTP...I.TRL | |
Retrocopy | MAPTKKGVEKKKG<LSANNKMVTQEYTV<HIHKCTHEVNFKKHAPQALKRI*KCAMKEMGTPYLFINTRL |
Parental | NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
NKAVWAK.IRN..Y.I.V.LSRK.N.DEDSPN.LY.LV.YV.VTTFKNLQTVNVDEN | |
Retrocopy | NKAVWAK*IRNALYHIHVQLSRKHNKDEDSPNELYALVIYVYVTTFKNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |