RetrogeneDB ID: | retro_tsyr_1861 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_626278:143..442(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 61.17 % |
Parental protein coverage: | 81.6 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KKGRSAINE-VVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRN |
K.G.SA....V.T.E.....H..IH..GF.K.A..AL..IR.F.MKEMGTP.V.ID.R.NK.VW.KGI.N | |
Retrocopy | KNGHSATYR<VETPEHFFYYH--IHMMGFMKHASWALLNIRTFVMKEMGTPYVCIDIRFNKSVWVKGIKN |
Parental | VPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVT |
V.Y.I.V.LSRK.NED..SPNKLYTLVTYVP.T | |
Retrocopy | VSYHICVQLSRKHNEDKNSPNKLYTLVTYVPAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |